CDS

Accession Number TCMCG007C59914
gbkey CDS
Protein Id XP_009103540.2
Location join(4634..5267,5754..6127)
Gene LOC103829616
GeneID 103829616
Organism Brassica rapa

Protein

Length 335aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009105292.3
Definition protein SHORT INTERNODES [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI- related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009739        [VIEW IN EMBL-EBI]
GO:0009740        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009937        [VIEW IN EMBL-EBI]
GO:0009938        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010476        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048443        [VIEW IN EMBL-EBI]
GO:0048466        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048653        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071370        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGGCTTTTTCTCGCTAGGCAACGGCACAGGAGTAGATGGAGGAGGAAGCCGCCAAGACGCCACTACTACTAATACAAATAATAATTCTTCTCCATCCGGAAACGAATCTTGGCTCTGGTGCAGAAACCCTAACTCAAACGCAAACGCTGGGTGTGGTGATATCGCTCCTTCTTACAAAGGAACACTTGAGTTATGGCAACACTCAAACAATCAACAAATCATTTTCCAGCAGCAGCAGCAACAAAGGCTGAATCTCTACACTTCCGCTGCTGGTTTAGGCGTTGGTCCAAGCAACCGGAGCTTAATTGAAGCTTCCGGCGGTGAAGCCTCCGGTTTAACGATGATGAGAAGTGGTGGCGGCGGCGGCGGACCCAGCTGCCAGGACTGTGGGAACCAAGCTAAGAAAGATTGCGCTCACATGAGGTGCAGGACTTGCTGCAAGAGCCGAGGCCTTGAGTGTCCCACTCACGTGAAAAGCACGTGGGTTCCTGCCGCCAAACGCCGGGAACGCCAACAGCAGCTTGCCTCCTCTCAGCATCCGCAAGGTGAGAACGTTCCTAAACGGCCGAGAGAGCATTTCCCAGTCCCAGCAAAATCTACTTCCCTTGTGTGCACTCATAACACCTTAGGGCTACAGGTTGGAAATTTTCCACCGGAAATTAGCTCATCTGCAACTTTCCAGTGTGTGCGTGTGAGTTCGGTTGATGAGGGAGAAGATGAATATGCATACAAAACAGCTGTGAGTATAGGCGGTCACGTATTCAAAGGTATTCTCTACGACCAAGGTCCGGCCGAGAGAAGCTCCTCGGACGGTGGATCTCAGCCGTTGAATCTCATAACCGCAGGGCCATCGGCCTCCTCGTCAAGCGCAAAGGTGAGCTGCAACAATGGAGTCGTTGGCTCCACTTCAGATCATTACATTGATCCTGCCTCACTTAATTATCCTACCTCCAACAACAGTTTCATCACTGGTACACACTTCTTCTCCAACCCTAGATCTTGA
Protein:  
MAGFFSLGNGTGVDGGGSRQDATTTNTNNNSSPSGNESWLWCRNPNSNANAGCGDIAPSYKGTLELWQHSNNQQIIFQQQQQQRLNLYTSAAGLGVGPSNRSLIEASGGEASGLTMMRSGGGGGGPSCQDCGNQAKKDCAHMRCRTCCKSRGLECPTHVKSTWVPAAKRRERQQQLASSQHPQGENVPKRPREHFPVPAKSTSLVCTHNTLGLQVGNFPPEISSSATFQCVRVSSVDEGEDEYAYKTAVSIGGHVFKGILYDQGPAERSSSDGGSQPLNLITAGPSASSSSAKVSCNNGVVGSTSDHYIDPASLNYPTSNNSFITGTHFFSNPRS